Sequence Features Annotator
>Demo Sequence NTTGGGTTCCACGGACTCCGCGGAGGCGGCCGCTCTAGACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGGTTGCAAGTTAGTCAGCAAAAAT GTCGTCTCAGCTGGTTTGGGAGTGCATCAAGGGCCACAACAGCAAGCTGCGCAAGGCCGCCAAGGGCATTGTGTTCAGCGCTGAGGCCGGCAACCTGTAC AACAAGCACAGCTACAAGTACTCGGGCCTGGTGAACGCCAAGACCGTGGACGTTGCCGCTGATGGCGAGGCCGTCAAGCTGACCGTGGGCCGCGTGAAGA ACGCGAGCAAGCCCAGCGTGTCCAAGTTCAGCATGACCATGAAGAAGCACAGCCGCGGCGTGTGCGCCGCCGTGGGCAAGCAGGTGTCCAGCTACCGGCC AGACCTGAAGGCCGCTGCCCAGGCCCGTGCTGCTGCCGTGCACAAGAGCATCCGCGTTGCCCGCGCCAACAAGAAGTAAATGGATCGTGGCAGCCAGGAG CAGAGCTGTGTGGGCTGCGGCTGCCGCGGCCGGCGCTGCGCGCTGTCGAGGCGGGCGCGCTTAGGCTGAGGGAGCTGGCGGCGTGTGTGGGGTGTCGCAG GAGGCGGGTGCCTCGGCACCGCAATGTGTAACCGCTGAGTTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGGGGGGGCCCGGTACCCA ATTCGCCCTATAGTGAGTCGTATTACAATTCACTGGCCGTCGTTTTACAACGTCGTGACTGGGAAAACCCTGGCGTTACCCAACTTAATCGCCTTGCAGC ACATCCCCCTTTCGCCAGCTGGCGTAATAGCGAAGAGGCCCGCACCGATGGCCCTTCCCACAGTTGCGCAGCCTGAATGGCGAATGGCAAATGGTAAGCG TTAATATTTTGTTAAAAATCGCGTTAAATTTTTGTTAAATCAGCTCATTTTTTAACAATAGGGCCGAAATCGGCAAAATCCCCTATAAATCAAAAA
Optional Quality Scores:
>Demo Sequence 0 3 8 7 9 7 7 6 6 6 6 8 9 10 9 8 8 10 10 15 15 14 9 9 9 10 18 20 30 26 15 16 18 20 20 20 14 22 18 24 28 28 28 28 30 35 36 50 50 57 57 47 43 43 43 47 47 48 50 54 47 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 48 46 46 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 59 59 57 57 57 59 59 59 57 57 57 57 57 57 57 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 59 59 57 57 59 59 59 59 68 57 57 43 46 46 54 54 54 59 59 59 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 54 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 48 48 59 48 48 48 48 48 48 57 59 59 59 59 59 59 59 59 48 48 42 47 47 47 44 44 44 39 39 44 44 44 59 47 47 47 48 48 48 59 48 48 48 48 48 43 47 43 47 47 37 37 35 39 39 43 40 41 28 28 41 41 43 41 47 35 35 35 35 35 32 40 40 59 47 43 39 47 34 34 23 28 28 28 14 15 15 32 41 59 59 44 44 44 37 37 37 34 28 22 22 30 30 37 32 32 28 28 13 13 13 27 28 43 35 28 28 18 18 13 21 15 26 26 28 28 28 34 34 48 48 48 41 34 34 28 28 28 34 32 31 30 28 13 13 13 21 25 32 32 33 36 37 27 32 23 20 32 24 23 23 22 30 28 23 18 14 14 14 25 23 26 22 22 19 24 22 22 28 24 26 19 23 24 22 22 20 26 32 31 31 31 21 25 12 12 12 27 19 29 25 25 25 19 19 15 19 23 34 25 29 37 29 29 34 21 14 11 11 12 18 18 23 23 23 18 12 12 9 11 11 12 12 9 12 9 11 11 9 9 9 11 11 12 25 11 11 11 15 12 12 10 10 13 10 10 10 17 18 25 20 20 16 20 15 15 10 10 10 12 16 24 24 24 9 9 9 11 11 10 10 10 10 13 14 19 15 15 11 11 11 16 18 17 13 11 9 9 9 10 8 8 8 8 8 9 9 9 9 9 9 15 24 17 11 11 11 11 11 20 13 9 8 10 8 11 11 9 9 10 7 8 8 9 8 14 10 8 8 8 8 8 15 10 10 10 11 9 9 9 9 12 10 15 16 9 9 9 9 12 12 12 7 8 7 8 8 8 10 10 12 11 16 15 16 16 13 16 12 15 21 18 9 10 8 8 8 8 8 8 8 9 11 8 8 8 8 8 10 10 10
Choose a Fasta file to upload(Limit 10MB):
(Note: Only the first sequence will be used)
Choose a Quality file to upload(Limit 10MB):
Current Feature Highlights:
Name
Range
Colors
Description
5TSS Vector
29 to 62
Colors
Vector (...CGGGCTGCAG)
5TSS Enzyme Site
63 to 68
Colors
EcoRI(GAATTC)
5TSS Adapter
69 to 77
Colors
Adaptor(GGCACGAGG)
3TSS PolyA
644 to 677
Colors
PolyA (...AAAAAAAAAA)
3TSS Enzyme Site
678 to 683
Colors
Xhol(CTCGAG)
3TSS Primer
684 to 727
Colors
Primer (GGGGGGCCC...)
Name
Start
End
Highlight Colors
Description
New Feature:
Text
Background